 |
PDBsum entry 3q2h
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3q2h calculated with MOLE 2.0
|
PDB id
|
|
|
|
3q2h
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
4 pores,
coloured by radius |
 |
6 pores,
coloured by radius
|
6 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.94 |
2.82 |
29.3 |
-0.32 |
0.08 |
16.7 |
72 |
 |
3 |
2 |
0 |
4 |
2 |
2 |
0 |
 |
NA 704 B
|
 |
 |
2 |
 |
1.93 |
2.03 |
30.9 |
0.37 |
0.28 |
14.2 |
75 |
3 |
2 |
0 |
6 |
2 |
2 |
0 |
QHF 2 B ZN 402 B
|
 |
3 |
 |
1.51 |
1.51 |
33.6 |
-1.92 |
-0.81 |
21.8 |
87 |
5 |
4 |
2 |
0 |
0 |
0 |
0 |
|
 |
4 |
 |
2.37 |
3.26 |
37.0 |
-1.89 |
-0.43 |
16.5 |
80 |
2 |
2 |
2 |
2 |
0 |
2 |
0 |
|
 |
5 |
 |
2.02 |
2.67 |
40.5 |
-0.49 |
0.00 |
15.3 |
76 |
4 |
3 |
2 |
4 |
2 |
1 |
0 |
NI 615 A MG 621 A
|
 |
6 |
 |
1.18 |
1.22 |
77.9 |
-1.82 |
-0.61 |
22.0 |
82 |
8 |
6 |
7 |
5 |
1 |
2 |
0 |
NI 504 A CD 602 A NI 607 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |