 |
PDBsum entry 3q2h
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3q2h calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3q2h
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
6 tunnels,
coloured by tunnel radius |
|
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.45 |
1.67 |
28.8 |
-2.04 |
-0.50 |
23.3 |
85 |
|
4 |
3 |
4 |
0 |
2 |
1 |
0 |
|
|
 |
|
2 |
 |
1.41 |
1.74 |
29.6 |
-1.99 |
-0.47 |
22.8 |
82 |
4 |
3 |
4 |
0 |
3 |
1 |
0 |
|
|
3 |
 |
1.44 |
1.67 |
30.3 |
-1.91 |
-0.56 |
21.2 |
84 |
3 |
3 |
4 |
0 |
2 |
1 |
0 |
|
|
4 |
 |
1.44 |
1.67 |
41.2 |
-2.07 |
-0.44 |
27.5 |
86 |
7 |
4 |
3 |
2 |
2 |
0 |
0 |
|
|
5 |
 |
1.43 |
1.67 |
42.0 |
-2.04 |
-0.40 |
27.3 |
84 |
7 |
4 |
3 |
2 |
3 |
0 |
0 |
|
 |
6 |
 |
1.40 |
1.45 |
42.7 |
-1.99 |
-0.48 |
25.9 |
86 |
6 |
4 |
3 |
2 |
2 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program