PDBsum entry 3q22 Go to PDB code:  Pore analysis for: 3q22 calculated with MOLE 2.0 PDB id 3q22 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   26 pores, coloured by radius 26 pores, coloured by radius 26 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.70 1.70 30.8 -1.94 -0.70 16.9 87 4 1 2 0 0 1 0  DT 3 D DC 5 D DA 6 D DA 7 D DA 8 D DA 9 D DC 19 D 2 2.45 3.72 53.6 -2.17 -0.70 16.1 81 3 3 4 0 2 3 0   3 1.73 1.84 59.4 -0.66 -0.18 15.8 78 3 5 1 5 1 2 0   4 1.44 1.53 72.6 -2.14 -0.51 26.2 83 5 8 3 4 1 1 0  DG 10 D DA 11 D DA 12 D DG 18 D DC 19 D DT 20 D DT 23 D 5 1.57 1.58 75.0 -2.03 -0.61 25.9 82 6 9 5 5 1 2 0   6 2.18 2.38 76.2 -1.56 -0.42 21.4 85 7 6 8 4 1 1 0  DA 6 D DA 7 D GTP 26 D 7 1.77 1.80 80.6 -1.61 -0.59 16.8 86 5 8 10 4 2 1 0   8 1.76 1.78 80.3 -1.54 -0.46 18.0 85 4 10 10 4 3 1 0   9 1.39 1.39 82.5 -1.85 -0.67 18.2 86 5 10 10 2 2 2 0   10 1.35 1.35 82.3 -1.76 -0.56 18.5 84 4 12 10 2 3 2 0   11 2.03 2.06 97.3 -1.97 -0.75 23.2 87 7 8 6 5 0 1 0  DT 3 D DC 4 D DG 10 D DT 20 D 12 1.54 1.54 106.3 -0.89 -0.30 16.0 83 7 5 9 12 3 2 0  DA 6 D DA 7 D GTP 26 D 13 1.61 1.98 107.6 -0.93 -0.48 12.3 81 5 4 4 10 2 2 0  DT 3 D DC 4 D DG 10 D DT 20 D 14 1.55 1.79 115.7 -1.74 -0.36 28.5 76 9 12 2 5 4 1 0   15 1.50 1.78 118.1 -1.95 -0.57 26.4 80 11 11 4 3 3 1 0   16 1.62 1.61 131.2 -1.73 -0.52 17.9 83 7 8 10 5 4 2 0   17 1.44 1.44 133.2 -1.94 -0.60 18.6 82 8 10 10 3 4 3 0   18 2.51 2.51 133.6 -2.25 -0.59 26.6 83 15 13 10 5 1 2 0  GTP 1107 A DA 6 C 19 1.42 1.59 136.2 -1.64 -0.57 19.9 87 8 10 7 8 1 1 0  DG 10 D DA 11 D DA 12 D DG 18 D DC 19 D DT 20 D 20 1.46 1.61 134.7 -2.01 -0.65 23.4 88 10 10 7 7 0 0 0  DA 12 D DT 23 D 21 1.62 1.78 174.8 -2.01 -0.61 24.9 85 14 14 8 7 1 0 0  DG 13 C 22 1.61 1.59 174.0 -1.78 -0.52 16.8 84 13 11 18 9 4 3 0  GTP 1107 A DA 6 C 23 1.47 1.77 192.1 -2.18 -0.62 23.6 83 13 9 7 7 1 1 0  DG 13 C 24 1.67 1.81 201.4 -1.89 -0.59 21.1 86 13 15 15 9 2 1 0  DG 13 C 25 1.46 1.77 207.5 -2.10 -0.54 25.1 81 19 16 10 9 3 3 0  GTP 1107 A DA 6 C 26 1.65 1.93 279.0 -2.08 -0.56 23.9 84 23 21 16 12 2 2 0  GTP 1107 A DA 6 C DG 13 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.