 |
PDBsum entry 3q22
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3q22 calculated with MOLE 2.0
|
PDB id
|
|
|
|
3q22
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
10 tunnels,
coloured by tunnel radius |
 |
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.94 |
1.94 |
17.7 |
-0.28 |
-0.17 |
18.7 |
83 |
 |
3 |
2 |
0 |
3 |
0 |
0 |
0 |
 |
DT 3 D
|
 |
 |
2 |
 |
1.43 |
1.44 |
15.3 |
-1.43 |
-0.59 |
14.2 |
85 |
1 |
2 |
2 |
0 |
1 |
0 |
0 |
|
 |
3 |
 |
1.88 |
1.88 |
17.2 |
-0.92 |
-0.42 |
16.3 |
87 |
3 |
1 |
1 |
4 |
0 |
0 |
0 |
|
 |
4 |
 |
1.31 |
1.32 |
24.4 |
-0.40 |
-0.19 |
15.7 |
89 |
2 |
2 |
1 |
3 |
0 |
0 |
0 |
|
 |
5 |
 |
1.09 |
1.39 |
18.0 |
1.06 |
0.34 |
5.6 |
79 |
1 |
0 |
2 |
9 |
1 |
1 |
0 |
|
 |
6 |
 |
1.10 |
1.39 |
18.7 |
0.85 |
0.38 |
5.7 |
79 |
1 |
0 |
2 |
9 |
1 |
1 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |