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PDBsum entry 3pv0
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Tunnel analysis for: 3pv0 calculated with  MOLE 2.0
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PDB id
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3pv0
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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18 tunnels,
coloured by
tunnel radius
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18 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.52 |
2.45 |
43.1 |
-1.67 |
-0.36 |
15.7 |
80 |
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5 |
4 |
8 |
3 |
4 |
1 |
0 |
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GLC 1 C
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2 |
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2.40 |
3.30 |
46.9 |
-2.33 |
-0.45 |
24.3 |
79 |
6 |
6 |
4 |
1 |
3 |
2 |
0 |
GLC 1 C
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3 |
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1.64 |
1.64 |
48.1 |
-2.24 |
-0.42 |
20.0 |
77 |
4 |
6 |
5 |
3 |
4 |
1 |
0 |
GLC 1 C GLC 2 C
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4 |
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1.25 |
1.29 |
49.1 |
-1.57 |
-0.34 |
16.6 |
81 |
5 |
5 |
7 |
5 |
3 |
1 |
0 |
GLC 1 C GLC 2 C
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5 |
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1.49 |
1.51 |
50.3 |
-1.45 |
-0.24 |
15.1 |
83 |
5 |
5 |
8 |
6 |
3 |
1 |
0 |
GLC 1 C GLC 2 C
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6 |
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1.25 |
1.29 |
53.0 |
-2.18 |
-0.45 |
24.2 |
81 |
6 |
7 |
4 |
3 |
2 |
2 |
0 |
GLC 1 C GLC 2 C
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7 |
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1.52 |
1.57 |
54.1 |
-2.08 |
-0.35 |
22.6 |
82 |
6 |
7 |
4 |
4 |
2 |
2 |
0 |
GLC 1 C GLC 2 C
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8 |
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1.25 |
1.30 |
54.1 |
-2.04 |
-0.43 |
20.1 |
78 |
4 |
7 |
5 |
5 |
4 |
1 |
0 |
GLC 1 C GLC 2 C
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9 |
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1.49 |
1.49 |
55.3 |
-1.91 |
-0.31 |
18.3 |
80 |
4 |
7 |
5 |
7 |
4 |
1 |
0 |
GLC 1 C GLC 2 C
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10 |
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1.89 |
2.24 |
61.1 |
-1.85 |
-0.22 |
22.1 |
73 |
7 |
5 |
8 |
5 |
5 |
1 |
0 |
GLC 1 C GLC 2 C
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11 |
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1.26 |
1.31 |
67.1 |
-1.78 |
-0.25 |
21.9 |
75 |
7 |
6 |
8 |
7 |
4 |
1 |
0 |
GLC 1 C GLC 2 C
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12 |
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1.49 |
1.55 |
68.3 |
-1.76 |
-0.19 |
20.7 |
76 |
7 |
6 |
8 |
8 |
4 |
1 |
0 |
GLC 1 C GLC 2 C
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13 |
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1.77 |
3.33 |
75.8 |
-1.43 |
-0.09 |
16.0 |
76 |
6 |
5 |
8 |
7 |
7 |
1 |
0 |
GLC 1 C GLC 2 C
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14 |
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1.28 |
1.32 |
87.5 |
-0.92 |
0.03 |
15.9 |
77 |
6 |
6 |
8 |
13 |
7 |
1 |
1 |
GLC 1 C GLC 2 C
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15 |
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1.47 |
1.82 |
18.4 |
3.05 |
0.97 |
0.5 |
84 |
0 |
0 |
1 |
8 |
2 |
0 |
0 |
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16 |
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1.41 |
1.58 |
15.1 |
0.97 |
-0.05 |
1.7 |
82 |
0 |
0 |
1 |
5 |
1 |
0 |
0 |
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17 |
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1.29 |
1.45 |
15.4 |
-1.14 |
-0.37 |
16.4 |
83 |
4 |
0 |
0 |
2 |
2 |
0 |
0 |
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18 |
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1.30 |
1.45 |
17.2 |
-1.11 |
-0.17 |
17.4 |
81 |
3 |
1 |
0 |
3 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program