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PDBsum entry 3pv0

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Pore analysis for: 3pv0 calculated with MOLE 2.0 PDB id
3pv0
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.80 1.95 31.9 -0.19 0.29 10.2 69 0 3 2 5 4 1 1  PGV 4001 F
2 1.95 2.14 62.2 -1.03 -0.50 16.6 80 5 4 5 7 1 1 1  
3 1.10 1.27 76.3 -1.10 -0.16 19.7 81 5 4 4 8 1 2 0  
4 1.11 1.27 85.2 -0.50 0.12 13.9 73 5 3 4 9 5 3 1  PGV 4001 F
5 1.16 1.26 98.4 1.13 0.36 5.9 74 5 2 2 22 8 2 1  GLC 1 D
6 1.28 1.29 106.4 0.26 0.10 11.7 75 5 4 4 19 7 2 1  GLC 1 D
7 1.86 2.00 108.4 -1.18 -0.49 17.6 85 6 7 9 12 3 1 0  
8 1.30 1.29 136.9 -1.76 -0.36 20.8 82 9 8 5 8 2 5 0  
9 1.18 1.95 169.5 -0.72 -0.29 13.2 83 10 3 11 16 3 5 0  
10 1.17 2.01 181.7 -0.11 -0.04 8.7 79 9 3 12 20 2 6 1  
11 1.29 1.32 198.2 -0.08 -0.07 10.2 77 10 3 11 29 11 6 1  GLC 1 D
12 1.21 1.22 210.4 0.33 0.09 7.1 75 9 3 12 33 10 7 2  GLC 1 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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