PDBsum entry 3pup Go to PDB code:  Pore analysis for: 3pup calculated with MOLE 2.0 PDB id 3pup Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.20 2.45 47.2 -1.34 -0.20 16.4 76 4 4 3 3 6 1 0  OS1 421 B 2 2.06 2.39 49.8 -0.80 -0.07 14.2 74 4 4 2 5 6 1 0  OS1 421 A 3 2.81 3.03 80.6 -1.25 -0.37 13.1 81 5 2 4 4 2 3 0   4 1.21 1.18 125.5 -1.44 -0.40 15.4 81 6 6 6 4 6 3 0  OS1 421 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.