PDBsum entry 3pmb Go to PDB code:  Tunnel analysis for: 3pmb calculated with MOLE 2.0 PDB id 3pmb Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.37 1.47 23.7 -1.82 -0.78 23.4 85 4 4 1 0 2 1 0  NA 1 D 2 1.35 1.49 27.0 -0.96 -0.58 13.6 83 1 4 2 2 2 0 0   3 1.17 1.41 17.0 1.57 0.63 10.2 85 2 1 1 5 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.