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PDBsum entry 3os2

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Top Page protein dna_rna ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3os2 calculated with MOLE 2.0 PDB id
3os2
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.59 1.63 26.5 -1.79 -0.20 17.1 67 5 0 0 0 2 3 0  DT 3 C DT 5 C DC 6 C DC 10 D DC 11 D DA 12 D
2 1.42 2.01 28.8 2.41 0.86 3.2 68 2 0 0 9 2 0 0  
3 1.60 2.24 47.8 -0.46 -0.17 9.7 71 3 1 1 4 3 2 0  DC 6 C DA 7 C DT 8 C DT 8 D DC 10 D DC 11 D DA 12
D
4 1.56 1.96 49.0 -0.80 -0.32 12.9 70 5 1 1 4 4 4 0  DT 3 C DT 5 C DC 6 C DA 7 C DT 8 C DT 8 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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