 |
PDBsum entry 3os2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3os2 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
3os2
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 tunnels,
coloured by tunnel radius |
|
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.27 |
1.29 |
17.8 |
-1.57 |
-0.21 |
18.7 |
87 |
|
3 |
1 |
1 |
3 |
1 |
1 |
0 |
|
DC -4 T DG -3 T
|
 |
|
2 |
 |
1.73 |
1.99 |
18.4 |
0.12 |
-0.17 |
6.3 |
78 |
2 |
1 |
0 |
4 |
1 |
1 |
0 |
|
|
3 |
 |
1.27 |
1.40 |
21.4 |
-0.88 |
-0.23 |
15.3 |
89 |
3 |
2 |
4 |
3 |
1 |
0 |
0 |
|
 |
4 |
 |
1.37 |
1.37 |
16.1 |
-1.58 |
-0.72 |
13.9 |
95 |
0 |
2 |
3 |
1 |
0 |
1 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program