PDBsum entry 3ogx Go to PDB code:  Tunnel analysis for: 3ogx calculated with MOLE 2.0 PDB id 3ogx Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.38 21.4 -1.00 0.03 11.6 86 3 0 3 1 2 1 0   2 1.15 1.44 26.6 -0.02 0.04 7.7 92 3 0 5 5 1 0 0  TLA 172 C 3 1.18 1.43 32.7 -0.23 -0.36 5.7 86 2 0 2 4 2 0 0  TLA 172 C GOL 172 D 4 1.17 1.40 35.0 -1.71 -0.41 9.3 77 4 1 4 1 2 3 1   5 1.17 1.39 38.9 -1.73 -0.29 11.8 78 5 1 5 2 3 3 0  SGN 1 E UAP 2 E 6 1.17 1.40 39.5 -1.09 -0.05 9.4 81 3 1 4 2 3 1 0   7 1.17 1.40 41.5 -1.74 -0.32 17.4 73 6 2 4 2 4 2 2  SGN 1 E UAP 2 E 8 1.22 1.40 16.7 -1.44 -0.06 11.8 76 2 0 2 0 2 0 0   9 1.23 1.38 17.4 -0.85 0.27 12.3 75 3 0 1 1 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.