PDBsum entry 3ogp Go to PDB code:  Tunnel analysis for: 3ogp calculated with MOLE 2.0 PDB id 3ogp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.93 1.99 22.0 0.68 0.00 8.6 88 0 3 1 9 0 0 0  017 200 A 017 200 B 2 1.41 2.86 23.1 0.81 0.01 6.8 89 1 1 1 7 0 0 0  017 200 A 017 200 B 3 1.42 1.42 24.1 -1.52 -0.73 19.6 88 1 3 0 1 0 0 0   4 1.67 2.94 17.7 -0.68 -0.28 13.6 91 1 2 1 2 0 0 0   5 1.23 1.99 25.7 -0.63 -0.31 11.3 76 1 2 1 4 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.