PDBsum entry 3nyn Go to PDB code:  Tunnel analysis for: 3nyn calculated with MOLE 2.0 PDB id 3nyn Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.60 117.1 0.24 0.10 15.1 73 7 6 2 22 3 2 1  SGV 577 B 2 1.34 2.18 15.8 1.13 0.49 1.6 64 0 0 1 5 3 0 0   3 1.40 2.73 17.0 1.48 0.76 1.4 51 0 0 1 4 4 0 0   4 1.38 1.89 16.0 -0.31 0.15 20.9 84 2 2 3 3 0 0 1   5 1.40 1.72 22.6 -1.68 -0.28 29.3 85 3 3 4 3 0 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.