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PDBsum entry 3nyn
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Pore analysis for: 3nyn calculated with MOLE 2.0
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PDB id
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3nyn
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.81 |
1.97 |
29.3 |
-2.44 |
-0.24 |
33.8 |
77 |
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6 |
2 |
0 |
1 |
1 |
1 |
0 |
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SO4 582 B
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2 |
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1.63 |
1.63 |
55.5 |
-1.65 |
-0.33 |
22.0 |
83 |
9 |
4 |
4 |
3 |
0 |
4 |
0 |
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3 |
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1.95 |
4.09 |
60.5 |
-2.35 |
-0.59 |
32.1 |
74 |
5 |
4 |
1 |
0 |
1 |
2 |
1 |
SO4 579 B
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4 |
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1.20 |
3.14 |
71.8 |
-0.71 |
-0.26 |
15.7 |
83 |
7 |
6 |
4 |
10 |
0 |
2 |
0 |
SGV 577 B
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5 |
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1.37 |
2.39 |
71.9 |
-0.97 |
-0.31 |
16.8 |
81 |
8 |
7 |
6 |
9 |
1 |
0 |
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SGV 577 B
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6 |
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1.09 |
1.09 |
34.3 |
-2.78 |
-0.71 |
32.2 |
77 |
6 |
4 |
2 |
0 |
1 |
0 |
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SO4 584 A
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7 |
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1.40 |
2.73 |
46.8 |
-1.02 |
-0.32 |
21.8 |
77 |
8 |
6 |
1 |
7 |
0 |
0 |
0 |
SGV 577 A
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8 |
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1.38 |
2.60 |
71.8 |
-1.23 |
-0.41 |
18.4 |
80 |
8 |
6 |
6 |
8 |
1 |
1 |
0 |
SGV 577 A
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9 |
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1.56 |
1.57 |
188.2 |
-1.66 |
-0.50 |
22.6 |
83 |
10 |
5 |
6 |
2 |
0 |
2 |
1 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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