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PDBsum entry 3mg8

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3mg8 calculated with MOLE 2.0 PDB id
3mg8
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.67 1.67 40.8 -1.46 -0.45 19.1 91 3 3 3 3 0 1 0  
2 2.02 4.51 76.1 -2.68 -0.65 28.5 84 12 7 7 3 3 1 0  
3 1.78 4.36 95.9 -2.12 -0.34 25.7 76 10 11 6 4 8 1 0  
4 1.75 4.08 105.1 -1.79 -0.23 22.6 79 10 7 5 4 7 0 0  
5 2.21 2.37 106.9 -1.98 -0.46 23.4 82 17 7 6 3 4 1 0  
6 1.73 1.93 111.1 -2.32 -0.47 28.3 80 17 12 7 5 4 0 0  
7 2.34 3.66 114.7 -2.04 -0.26 23.5 76 10 7 5 3 10 1 0  
8 1.68 2.84 119.5 -2.26 -0.43 26.1 79 16 9 8 5 8 2 0  
9 1.77 2.92 125.1 -2.54 -0.59 29.8 82 20 13 7 2 4 2 0  
10 1.74 1.93 126.7 -2.47 -0.50 27.4 77 15 12 6 3 7 1 0  
11 1.85 1.88 132.1 -2.18 -0.32 26.4 79 14 8 7 5 7 1 0  
12 1.85 4.50 147.3 -2.31 -0.41 29.5 80 20 12 8 7 4 1 0  
13 1.86 1.87 152.7 -2.33 -0.47 28.3 81 22 10 10 7 6 2 0  
14 1.82 2.07 152.4 -2.54 -0.53 29.5 79 20 13 8 5 4 1 0  
15 1.32 2.20 174.3 -2.53 -0.56 28.4 78 11 13 8 4 5 1 0  
16 1.73 1.87 205.8 -2.67 -0.50 29.1 82 27 14 13 5 5 0 0  
17 1.19 1.13 210.1 -2.36 -0.44 27.6 81 31 16 13 10 8 2 0  
18 1.73 4.35 207.6 -2.50 -0.50 27.2 82 28 14 13 7 6 0 0  
19 1.75 1.89 211.0 -2.79 -0.52 29.3 81 26 14 13 5 8 1 0  
20 1.68 4.22 212.7 -2.62 -0.48 27.9 81 27 14 13 6 9 1 0  
21 1.73 1.73 229.3 -2.41 -0.41 25.2 83 29 10 18 8 7 1 0  
22 1.77 1.91 233.2 -2.82 -0.54 30.6 83 31 14 15 8 4 1 0  
23 1.64 4.13 234.9 -2.62 -0.50 28.8 83 32 14 15 8 5 1 0  
24 1.73 1.72 234.5 -2.50 -0.40 25.6 82 28 10 18 7 10 2 0  
25 1.95 1.85 239.7 -2.36 -0.54 26.8 84 30 19 15 7 6 2 2  
26 1.74 1.73 256.7 -2.50 -0.43 26.6 84 33 10 20 10 7 2 0  
27 1.84 3.12 261.4 -2.49 -0.43 26.9 82 30 14 14 4 11 2 0  
28 1.95 1.84 263.7 -2.67 -0.46 28.2 81 33 15 15 5 11 3 0  
29 1.83 3.17 268.3 -2.57 -0.46 29.0 82 35 18 15 6 8 2 0  
30 1.91 2.09 405.9 -2.73 -0.49 30.7 81 43 23 19 9 10 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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