PDBsum entry 3mg8 Go to PDB code:  Tunnel analysis for: 3mg8 calculated with MOLE 2.0 PDB id 3mg8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 76 tunnels, coloured by tunnel radius 76 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.30 75.8 -0.70 -0.29 11.9 81 6 3 4 6 4 2 2   2 1.22 1.22 76.9 -0.65 -0.31 11.7 83 5 3 3 5 4 1 2   3 1.29 1.30 93.8 -0.92 -0.36 12.1 85 7 4 8 8 6 1 0  L3T 213 K MES 214 K 4 1.23 1.23 100.1 -0.84 -0.39 9.1 84 6 5 8 6 6 1 0  L3T 212 Y MES 213 Y 5 1.29 1.30 101.1 -1.17 -0.37 13.6 83 6 6 7 7 5 1 0   6 1.22 1.22 103.3 -1.09 -0.39 13.4 83 6 6 7 7 5 1 0   7 1.23 1.23 107.8 -0.92 -0.42 11.6 86 7 4 10 8 6 1 0  L3T 213 K MES 214 K 8 1.22 1.22 108.9 -1.46 -0.45 17.3 82 8 6 7 6 5 1 0   9 1.29 1.31 109.5 -1.46 -0.43 16.8 82 8 6 7 6 5 1 0   10 1.25 1.49 109.8 -1.08 -0.42 10.8 86 7 7 11 6 5 1 0  L3T 212 Y MES 213 Y 11 1.29 1.31 119.9 -1.26 -0.44 15.0 85 8 6 8 6 4 1 2   12 1.29 1.30 120.9 -2.08 -0.43 23.6 81 13 8 7 4 5 2 0   13 1.23 1.23 123.8 -1.18 -0.40 15.3 84 8 5 9 6 4 2 2   14 1.23 1.23 126.5 -2.10 -0.44 22.6 85 12 4 11 3 5 1 0   15 1.22 1.23 130.8 -2.10 -0.43 23.6 81 12 6 8 4 6 2 0   16 1.29 1.31 129.3 -2.23 -0.45 22.9 85 13 5 13 2 5 1 0   17 1.23 1.23 133.0 -1.61 -0.36 18.4 80 13 6 11 6 8 2 1   18 1.23 1.23 132.3 -1.95 -0.37 21.8 80 9 6 9 4 8 1 0   19 1.29 1.31 133.5 -1.63 -0.37 17.7 81 13 7 10 7 7 2 0   20 1.29 1.31 133.9 -1.91 -0.39 22.0 81 13 6 8 4 6 2 0   21 1.29 1.31 134.2 -2.11 -0.39 22.6 80 11 7 10 5 8 1 0   22 1.22 1.23 135.3 -2.09 -0.50 22.6 81 14 8 8 5 5 2 0   23 1.29 1.32 136.5 -2.21 -0.42 24.7 84 16 8 11 5 6 2 0   24 1.22 1.23 136.8 -1.58 -0.28 18.6 81 8 5 8 3 9 1 0   25 1.23 1.23 138.9 -2.07 -0.44 22.6 82 13 8 10 3 6 1 0   26 1.23 1.23 138.7 -2.01 -0.42 23.1 81 14 7 10 4 7 2 0   27 1.29 1.31 138.1 -1.51 -0.26 18.5 77 10 5 8 9 7 3 0   28 1.29 1.31 138.9 -2.35 -0.48 25.7 82 19 8 10 5 5 1 0   29 1.22 1.23 141.6 -1.80 -0.37 22.0 81 13 8 9 5 6 1 0   30 1.23 1.24 142.6 -1.98 -0.46 22.4 83 13 8 10 4 6 1 0   31 1.29 1.31 140.1 -1.88 -0.43 21.5 84 13 9 10 5 6 1 0   32 1.29 1.31 140.4 -2.06 -0.47 20.3 86 13 4 12 3 5 1 0   33 1.29 1.31 142.4 -2.17 -0.46 24.0 82 20 11 10 6 6 1 0   34 1.23 1.24 144.3 -1.90 -0.40 21.1 81 10 8 11 6 6 2 0   35 1.23 1.23 143.7 -2.14 -0.49 20.8 86 14 5 14 3 5 1 0   36 1.29 1.31 144.7 -2.08 -0.46 21.5 82 13 6 9 4 6 2 0   37 1.16 1.16 147.2 -2.16 -0.51 23.7 86 15 7 13 5 4 1 0   38 1.23 1.24 147.5 -1.59 -0.24 18.9 76 11 7 8 9 7 3 0   39 1.29 1.31 146.9 -1.62 -0.39 17.1 81 14 6 12 6 8 2 1   40 1.29 1.31 146.2 -1.97 -0.42 19.6 81 10 6 10 4 8 1 0   41 1.23 1.24 147.2 -1.78 -0.40 17.9 83 11 7 10 4 6 1 0   42 1.23 1.24 147.9 -1.61 -0.31 20.4 82 14 6 8 7 7 1 0   43 1.23 1.24 148.6 -2.05 -0.45 20.9 81 12 7 11 4 8 1 0   44 1.23 1.23 148.0 -1.74 -0.43 17.8 82 14 7 11 7 7 2 0   45 1.17 1.17 151.6 -2.60 -0.56 29.2 83 21 12 10 5 2 2 0   46 1.22 1.23 148.3 -1.89 -0.45 20.4 82 14 6 9 3 6 2 0   47 1.29 1.31 149.1 -1.45 -0.27 19.7 81 12 8 11 9 7 1 0   48 1.29 1.31 150.8 -1.60 -0.33 16.5 82 9 5 9 3 9 1 0   49 1.16 1.16 151.2 -1.78 -0.38 22.6 83 12 9 12 9 5 0 0   50 1.23 1.24 151.2 -1.54 -0.32 20.3 80 12 9 10 9 8 1 0   51 1.23 1.25 150.9 -2.21 -0.47 23.3 84 17 8 12 7 6 2 0   52 1.17 1.17 152.6 -2.16 -0.49 21.1 84 11 8 13 6 3 3 0   53 1.23 1.24 152.6 -1.44 -0.29 17.2 78 11 5 9 9 8 3 0   54 1.29 1.32 152.6 -1.94 -0.45 20.8 82 15 7 11 4 7 2 0   55 1.29 1.31 152.8 -2.09 -0.47 21.1 83 14 8 11 3 6 1 0   56 1.23 1.24 153.3 -2.34 -0.52 24.6 83 20 8 11 5 5 1 0   57 1.23 1.24 154.5 -1.90 -0.48 20.5 84 14 9 11 5 6 1 0   58 1.29 1.31 155.5 -1.82 -0.40 20.4 82 14 8 10 5 6 1 0   59 1.17 1.17 157.7 -2.16 -0.56 22.1 85 14 9 12 4 4 1 0   60 1.23 1.24 156.8 -2.15 -0.50 23.1 83 21 11 11 6 6 1 0   61 1.29 1.32 156.5 -1.98 -0.47 20.8 83 14 8 11 4 7 1 0   62 1.29 1.32 161.5 -1.57 -0.27 17.4 78 12 8 9 9 7 3 0   63 1.23 1.25 163.6 -1.52 -0.33 19.1 82 13 8 12 8 7 1 0   64 1.29 1.32 161.8 -1.68 -0.36 18.8 83 15 6 9 7 7 1 0   65 1.29 1.32 165.1 -1.61 -0.34 19.6 81 13 9 11 9 8 1 0   66 1.14 1.14 166.8 -2.34 -0.57 24.0 89 18 10 16 5 3 1 0   67 1.22 1.36 164.5 -1.75 -0.39 19.9 82 16 11 13 10 6 1 0   68 1.14 1.14 175.5 -1.81 -0.41 20.8 86 17 12 13 7 4 1 0   69 1.15 1.17 177.0 -2.64 -0.59 28.1 85 23 13 13 5 2 1 0   70 1.23 1.22 178.9 -1.76 -0.43 18.9 83 17 11 14 10 6 1 0   71 1.28 1.18 185.9 -1.81 -0.41 20.0 84 16 10 15 10 6 1 0   72 1.94 2.39 15.3 -1.03 0.02 31.6 65 2 2 0 3 0 0 0   73 1.30 3.08 17.9 -1.75 0.06 27.5 74 3 3 0 2 1 0 0   74 1.17 2.41 16.2 0.88 0.46 5.4 73 1 0 2 3 2 0 0   75 1.13 1.96 21.7 0.92 0.31 10.2 88 1 3 1 4 0 0 0   76 1.12 1.96 16.8 1.79 0.67 10.8 88 1 3 0 4 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.