PDBsum entry 3krk Go to PDB code:  Tunnel analysis for: 3krk calculated with MOLE 2.0 PDB id 3krk Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.65 33.9 0.62 0.04 4.6 77 2 0 5 6 3 1 0  NAG 1 F 2 1.64 1.78 38.9 0.58 0.08 5.8 83 2 1 3 6 4 0 0  ACD 700 A 3 1.32 1.66 44.7 0.37 0.01 6.7 79 3 1 6 6 3 1 0  NAG 1 D 4 1.14 1.34 45.7 -0.57 -0.13 11.3 80 3 4 2 5 4 2 0   5 1.63 2.18 46.6 1.63 0.70 3.0 76 1 0 3 10 8 1 0  ACD 700 A 6 1.13 1.34 47.6 -0.46 -0.10 8.9 79 3 4 3 5 4 1 2  GOL 624 A 7 1.29 1.65 52.1 -0.77 -0.28 11.7 76 5 4 6 5 5 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.