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PDBsum entry 3kqh

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Top Page protein dna_rna Protein-protein interface(s) pores links
Pore analysis for: 3kqh calculated with MOLE 2.0 PDB id
3kqh
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.62 2.81 39.6 -1.26 -0.52 16.3 88 3 4 4 4 0 1 1  DA 2 D DA 3 D DA 4 D DA 5 D
2 1.81 3.30 125.7 -1.26 -0.61 15.5 89 7 5 6 5 1 1 0  DA 5 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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