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PDBsum entry 3kqh
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Tunnel analysis for: 3kqh calculated with  MOLE 2.0
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PDB id
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3kqh
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.56 |
1.81 |
29.5 |
-1.64 |
-0.71 |
17.3 |
88 |
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1 |
3 |
2 |
1 |
0 |
1 |
1 |
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DA 2 C DA 3 C DA 4 C DA 5 C
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2 |
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1.56 |
1.84 |
36.1 |
-1.15 |
-0.56 |
11.7 |
86 |
3 |
2 |
3 |
3 |
0 |
3 |
0 |
DA 4 C DA 5 C
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3 |
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1.58 |
1.81 |
38.2 |
-0.94 |
-0.48 |
15.0 |
86 |
3 |
4 |
2 |
4 |
0 |
1 |
0 |
DA 4 C DA 5 C
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4 |
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1.60 |
1.84 |
79.9 |
-1.63 |
-0.61 |
15.9 |
89 |
5 |
6 |
8 |
4 |
0 |
2 |
1 |
DA 4 C DA 5 C DA 2 D DA 3 D DA 4 D
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5 |
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1.59 |
1.97 |
16.8 |
0.49 |
0.28 |
6.2 |
78 |
1 |
1 |
1 |
4 |
2 |
0 |
1 |
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6 |
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1.10 |
1.34 |
23.2 |
1.88 |
0.68 |
8.5 |
75 |
2 |
2 |
0 |
7 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program