PDBsum entry 3k5o Go to PDB code:  Pore analysis for: 3k5o calculated with MOLE 2.0 PDB id 3k5o Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   11 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.90 2.04 28.6 -1.67 -0.29 24.0 75 4 1 0 1 0 3 0   2 2.79 3.02 34.9 -1.85 -0.59 10.6 88 3 1 8 1 1 1 0   3 2.15 2.35 45.2 -1.75 -0.45 23.2 81 5 4 3 2 1 1 0   4 1.91 2.18 68.3 -2.65 -0.41 34.0 78 9 5 1 2 0 4 0   5 2.16 2.35 81.3 -2.66 -0.51 31.9 80 9 7 4 3 1 2 0   6 1.42 1.42 83.8 -1.68 -0.39 19.0 83 6 5 8 4 4 2 0   7 3.19 3.37 85.7 -2.61 -0.54 23.6 83 10 5 11 2 2 3 0   8 2.91 4.50 91.1 -2.70 -0.34 35.8 82 15 4 2 3 1 2 0   9 1.42 1.42 94.0 -2.29 -0.45 27.6 81 11 7 4 4 4 1 0   10 1.41 1.41 96.0 -1.64 -0.45 12.9 84 6 4 9 4 5 2 0   11 1.41 1.41 127.1 -1.99 -0.37 27.3 80 16 8 2 6 4 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.