PDBsum entry 3k5o Go to PDB code:  Tunnel analysis for: 3k5o calculated with MOLE 2.0 PDB id 3k5o Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 1.59 26.9 -0.94 -0.44 10.7 81 1 2 2 2 1 1 0   2 1.41 1.90 15.3 0.08 -0.10 3.9 64 1 0 0 2 2 2 0   3 1.49 2.52 16.6 -2.59 -0.11 26.8 76 3 2 1 0 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.