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PDBsum entry 3jvv

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protein ligands metals Protein-protein interface(s) links
Atp binding protein PDB id
3jvv

 

 

 

 

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Contents
Protein chains
331 a.a. *
Ligands
ACP ×3
CIT
Metals
_MG ×3
Waters ×89
* Residue conservation analysis
PDB id:
3jvv
Name: Atp binding protein
Title: Crystal structure of p. Aeruginosa pilt with bound amp-pcp
Structure: Twitching mobility protein. Chain: a, b, c. Engineered: yes
Source: Pseudomonas aeruginosa. Organism_taxid: 287. Strain: pa103. Gene: pa0395, pilt. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.60Å     R-factor:   0.247     R-free:   0.291
Authors: A.M.Misic,K.A.Satyshur,K.T.Forest
Key ref: A.M.Misic et al. (2010). P. aeruginosa PilT structures with and without nucleotide reveal a dynamic type IV pilus retraction motor. J Mol Biol, 400, 1011-1021. PubMed id: 20595000
Date:
17-Sep-09     Release date:   02-Jun-10    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P24559  (PILT_PSEAE) -  Type IV pilus retractation ATPase PilT from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Seq:
Struc:
344 a.a.
331 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
J Mol Biol 400:1011-1021 (2010)
PubMed id: 20595000  
 
 
P. aeruginosa PilT structures with and without nucleotide reveal a dynamic type IV pilus retraction motor.
A.M.Misic, K.A.Satyshur, K.T.Forest.
 
  ABSTRACT  
 
Type IV pili are bacterial extracellular filaments that can be retracted to create force and motility. Retraction is accomplished by the motor protein PilT. Crystal structures of Pseudomonas aeruginosa PilT with and without bound beta,gamma-methyleneadenosine-5'-triphosphate have been solved at 2.6 A and 3.1 A resolution, respectively, revealing an interlocking hexamer formed by the action of a crystallographic 2-fold symmetry operator on three subunits in the asymmetric unit and held together by extensive ionic interactions. The roles of two invariant carboxylates, Asp Box motif Glu163 and Walker B motif Glu204, have been assigned to Mg(2+) binding and catalysis, respectively. The nucleotide ligands in each of the subunits in the asymmetric unit of the beta,gamma-methyleneadenosine-5'-triphosphate-bound PilT are not equally well ordered. Similarly, the three subunits in the asymmetric unit of both structures exhibit differing relative conformations of the two domains. The 12 degrees and 20 degrees domain rotations indicate motions that occur during the ATP-coupled mechanism of the disassembly of pili into membrane-localized pilin monomers. Integrating these observations, we propose a three-state "Ready, Active, Release" model for the action of PilT.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
22466878 K.V.Korotkov, M.Sandkvist, and W.G.Hol (2012).
The type II secretion system: biogenesis, molecular architecture and mechanism.
  Nat Rev Microbiol, 10, 336-351.  
21265748 A.Ghosh, and S.V.Albers (2011).
Assembly and function of the archaeal flagellum.
  Biochem Soc Trans, 39, 64-69.  
21255118 M.D.Gray, M.Bagdasarian, W.G.Hol, and M.Sandkvist (2011).
In vivo cross-linking of EpsG to EpsL suggests a role for EpsL as an ATPase-pseudopilin coupling protein in the Type II secretion system of Vibrio cholerae.
  Mol Microbiol, 79, 786-798.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

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