PDBsum entry 3jvv Go to PDB code:  Pore analysis for: 3jvv calculated with MOLE 2.0 PDB id 3jvv Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.36 2.36 35.8 -1.93 -0.52 25.5 81 8 3 1 1 0 2 0  ACP 400 C 2 1.66 1.67 37.0 -0.23 -0.23 14.0 79 4 2 1 5 0 1 1  ACP 400 A MG 401 A 3 1.96 2.16 38.5 -2.25 -0.56 25.9 84 6 3 3 0 1 1 0   4 2.29 2.49 38.9 -2.64 -0.63 34.8 81 10 8 1 1 0 1 0  ACP 400 C MG 401 C 5 1.83 3.75 46.5 -1.74 -0.58 18.5 80 7 5 2 2 0 4 0  ACP 400 B 6 2.36 2.36 47.8 -1.68 -0.52 22.8 82 8 4 1 2 0 2 0  ACP 400 C 7 3.14 3.38 71.3 -2.01 -0.47 25.9 85 11 7 4 3 1 1 0  ACP 400 C MG 401 C 8 3.24 3.25 88.2 -1.93 -0.44 28.6 80 12 10 2 4 1 2 0  ACP 400 C MG 401 C 9 1.29 1.51 141.6 -1.48 -0.38 24.5 81 11 15 5 9 2 4 0   10 2.98 3.42 145.4 -1.25 -0.38 20.0 83 13 11 6 15 1 5 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.