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PDBsum entry 3it8

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3it8 calculated with MOLE 2.0 PDB id
3it8
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.92 2.18 50.7 -2.26 -0.58 28.3 80 5 4 2 2 2 0 0  
2 1.31 2.58 75.9 -1.86 -0.47 17.2 75 7 3 6 5 3 1 0  
3 1.36 1.53 79.5 -1.17 -0.26 18.7 81 9 4 4 6 3 1 0  
4 1.37 1.70 26.6 -1.56 -0.51 14.6 81 3 3 2 0 2 0 0  
5 1.27 2.08 27.1 -1.35 -0.24 17.4 72 3 3 4 4 3 0 0  
6 1.37 1.51 36.5 -0.59 -0.32 13.7 82 3 3 3 3 2 1 0  
7 1.37 1.51 49.3 -0.83 -0.31 12.6 79 5 2 3 3 3 1 0  
8 1.28 2.21 105.4 -1.86 -0.41 22.3 78 8 6 6 6 4 0 0  
9 1.37 1.52 143.1 -2.10 -0.44 23.4 76 12 9 6 6 5 1 0  
10 1.34 1.51 30.9 -0.40 -0.33 13.1 86 3 3 3 3 1 0 0  
11 1.33 2.10 27.4 -1.47 -0.29 16.9 73 3 3 4 3 3 0 0  
12 1.47 1.52 51.4 -1.41 -0.72 14.8 84 1 2 1 1 0 2 0  
13 1.46 1.51 61.0 -1.43 -0.83 16.9 83 1 4 1 1 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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