PDBsum entry 3gil Go to PDB code:  Pore analysis for: 3gil calculated with MOLE 2.0 PDB id 3gil Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.43 37.4 -1.18 -0.18 18.0 81 4 4 1 5 6 2 0  DGT 1414 B CA 1415 B CA 1416 B DG 1813 H 2DT 1814 H DC 1905 J 8OG 1906 J DC 1907 J 2 1.21 1.43 39.0 -1.83 -0.40 22.1 79 6 4 3 4 5 2 0  DGT 1414 B CA 1415 B CA 1416 B DG 1813 H 2DT 1814 H 8OG 1906 J DC 1907 J DT 1908 J 3 2.28 2.29 43.9 -1.74 -0.55 19.0 75 6 1 2 2 2 1 0  DG 1813 H DT 1908 J DA 1909 J DC 1910 J DC 1911 J 4 1.57 1.57 43.9 -1.79 -0.54 20.6 68 6 1 0 1 2 1 0  DG 1809 H DG 1810 H DT 1811 H DA 1812 H DC 1910 J DC 1911 J DA 1912 J DT 1913 J DC 1914 J DC 1915 J 5 1.29 1.31 55.7 -0.35 -0.18 8.2 81 3 1 1 8 2 3 0  DGT 1414 B DG 1813 H 2DT 1814 H DA 1903 J DA 1904 J DC 1905 J 8OG 1906 J DC 1907 J 6 1.30 1.31 59.6 -1.31 -0.41 14.9 82 5 1 3 8 1 3 0  DGT 1414 B DG 1813 H 2DT 1814 H DA 1903 J DA 1904 J DC 1905 J 8OG 1906 J DC 1907 J DT 1908 J 7 1.53 1.53 59.6 -1.21 -0.73 13.7 85 5 1 2 3 0 1 0  DG 1809 H DG 1810 H DT 1811 H DA 1812 H DG 1813 H DT 1908 J DA 1909 J DC 1910 J DA 1912 J DT 1913 J DC 1914 J 8 1.22 1.45 62.5 -1.94 -0.50 22.2 76 7 5 1 3 6 3 0  DGT 1414 B CA 1415 B CA 1416 B DG 1813 H 2DT 1814 H 8OG 1906 J DT 1908 J DA 1909 J DC 1910 J DC 1911 J 9 1.15 1.26 66.7 -1.52 -0.34 18.2 82 5 6 2 5 4 5 0  DGT 1414 B CA 1415 B CA 1416 B DG 1813 H 2DT 1814 H DA 1903 J DA 1904 J 10 1.13 1.13 76.4 -0.42 -0.36 10.3 82 3 2 1 5 0 3 0  DG 1809 H DG 1810 H DT 1811 H DA 1812 H DG 1813 H 2DT 1814 H DA 1903 J DA 1904 J DC 1905 J DT 1913 J DC 1914 J 11 1.29 1.31 83.8 -1.32 -0.47 15.1 79 6 3 2 7 2 4 0  DGT 1414 B DG 1813 H 2DT 1814 H DA 1903 J DA 1904 J DC 1905 J 8OG 1906 J DT 1908 J DA 1909 J DC 1910 J DC 1911 J 12 1.15 1.15 84.0 -0.35 -0.26 10.5 83 4 1 1 8 2 1 0  DGT 1414 B DG 1809 H DG 1810 H DT 1811 H DA 1812 H DG 1813 H 2DT 1814 H DC 1905 J 8OG 1906 J DC 1907 J DT 1913 J DC 1914 J 13 1.13 1.13 87.4 -1.36 -0.42 17.9 79 5 6 1 5 4 3 0  DGT 1414 B CA 1415 B CA 1416 B DG 1809 H DG 1810 H DT 1811 H DA 1812 H DG 1813 H 2DT 1814 H DC 1905 J DT 1913 J DC 1914 J 14 1.49 1.49 94.3 -1.26 -0.67 14.1 74 6 4 0 1 2 1 0  DG 1805 H DG 1806 H DA 1807 H DT 1808 H DG 1809 H DG 1810 H DT 1811 H DA 1812 H DC 1910 J DC 1911 J DA 1912 J DT 1913 J DC 1914 J DC 1915 J DA 1916 J DA 1917 J DC 1918 J 15 2.00 2.01 36.5 -0.47 0.03 19.5 88 4 0 2 3 0 0 0  DG 805 D DG 806 D DG 809 D DG 810 D DT 811 D DA 812 D DG 813 D 2DT 814 D DA 904 E DC 905 E DC 907 E DT 908 E DA 909 E DC 910 E DC 911 E 16 2.17 2.37 42.8 -2.50 -0.52 25.2 84 5 2 3 2 1 0 0  DGT 414 A DG 813 D 2DT 814 D DA 904 E DC 905 E 8 OG 906 E DC 907 E 17 1.74 1.88 48.0 -1.88 -0.54 21.6 78 6 2 2 1 2 0 0  DG 805 D DG 806 D DG 813 D DT 908 E DA 909 E DC 910 E DC 911 E Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.