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PDBsum entry 3gil
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Tunnel analysis for: 3gil calculated with  MOLE 2.0
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PDB id
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3gil
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.28 |
1.28 |
20.1 |
0.08 |
0.14 |
16.1 |
98 |
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2 |
0 |
1 |
2 |
0 |
0 |
0 |
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DT 808 D DG 809 D DG 810 D DT 811 D DA 812 D DG
813 D DA 904 E DC 905 E DC 907 E DT 908 E DA 909 E
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2 |
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1.37 |
1.36 |
23.4 |
-2.19 |
-0.50 |
27.0 |
92 |
4 |
0 |
2 |
0 |
0 |
0 |
0 |
DG 805 D DG 806 D DT 808 D DG 809 D DC 910 E DC
911 E
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3 |
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1.31 |
1.31 |
36.5 |
0.26 |
0.18 |
15.2 |
95 |
4 |
0 |
1 |
5 |
0 |
0 |
0 |
DT 808 D DG 809 D DG 810 D DC 905 E 8OG 906 E DC
907 E DT 908 E DA 909 E
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4 |
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1.32 |
1.77 |
17.3 |
-0.55 |
0.45 |
19.1 |
76 |
1 |
2 |
0 |
3 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program