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PDBsum entry 3ebc

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 3ebc calculated with MOLE 2.0 PDB id
3ebc
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 1 pore, coloured by radius 1 pore, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 1.64 70.4 -1.22 -0.64 13.1 80 5 4 4 3 2 1 0  MN 316 A DG 5 E DT 6 E DG 8 F DA 9 F DC 10 F DC
11 F DG 12 F DG 13 F DC 14 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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