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PDBsum entry 3ebc

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Top Page protein dna_rna metals Protein-protein interface(s) clefts links
Cleft analysis for: 3ebc PDB id
3ebc
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 7747.31 3.17 70.59 3 10.96 4 13.35 2 18 17 20 23 9 7 0  
2 2446.03 0.00 69.81 4 13.08 2 13.97 1 7 2 7 6 4 2 0  
3 1916.58 0.00 75.87 1 13.95 1 13.30 3 6 1 5 3 3 2 0  
4 2477.25 0.00 67.24 5 9.13 5 10.03 4 7 8 10 10 5 1 0  
5 1595.11 0.00 72.70 2 11.30 3 10.02 5 5 4 7 6 3 0 0  
6 1815.75 0.00 59.53 9 6.05 8 7.37 7 6 6 8 6 6 1 0  
7 1439.02 0.00 60.90 7 8.46 6 7.31 8 5 5 6 6 5 1 0  
8 469.55 0.00 54.66 10 6.61 7 6.48 10 3 1 2 1 2 1 0  
9 597.80 0.00 59.84 8 5.93 9 8.19 6 4 3 1 3 2 0 0  
10 332.44 0.00 64.09 6 4.74 10 7.27 9 1 1 2 3 2 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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