PDBsum entry 3dzd Go to PDB code:  Pore analysis for: 3dzd calculated with MOLE 2.0 PDB id 3dzd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.54 2.78 44.6 -3.22 -0.68 36.6 77 9 4 3 0 0 1 0   2 1.39 1.43 77.3 -3.01 -0.67 36.7 83 12 7 5 1 0 0 0  ADP 370 A ADP 370 B 3 1.52 1.51 129.3 -2.45 -0.54 30.6 81 19 8 4 4 1 2 0  ADP 370 A 4 1.61 1.62 133.4 -2.37 -0.52 29.8 81 19 8 4 4 1 2 0  ADP 370 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.