PDBsum entry 3dlh Go to PDB code:  Pore analysis for: 3dlh calculated with MOLE 2.0 PDB id 3dlh Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.14 2.70 30.6 -2.18 -0.63 25.0 83 4 1 1 2 0 0 0  DA 110 Y 2 2.15 2.57 47.7 -2.18 -0.58 28.7 83 6 4 2 3 1 1 0  ACY 686 B ACY 687 B DA 110 Y 3 2.42 2.63 52.2 -2.32 -0.63 25.4 84 9 2 1 1 0 0 0  DG 104 Y DG 105 Y DT 106 Y DA 107 Y DG 108 Y DT 109 Y DA 110 Y 4 2.43 2.62 56.2 -2.52 -0.58 32.1 85 7 5 2 1 0 1 0  ACY 686 B ACY 687 B DG 104 Y DG 105 Y DT 106 Y DA 107 Y DG 108 Y DT 109 Y DA 110 Y 5 1.99 2.02 56.4 -1.42 -0.43 23.9 84 9 3 0 4 0 0 0  DG 104 Y DG 105 Y DT 106 Y DA 107 Y DG 108 Y DT 109 Y DA 110 Y 6 2.35 3.13 60.1 -2.13 -0.45 26.6 85 10 4 4 4 1 0 0  ACY 686 B ACY 687 B DA 110 Y 7 1.19 1.19 26.7 -2.05 -0.66 20.7 86 4 1 1 2 0 0 0  DG 12 X DT 18 X DA 19 X DG 20 X 8 1.83 1.89 41.5 -2.85 -0.68 34.4 80 6 4 1 0 0 1 0  DG 4 X DG 5 X DT 6 X DA 7 X DG 8 X DT 9 X DA 10 X DG 12 X DT 18 X 9 1.84 1.89 42.9 -2.42 -0.56 31.2 79 7 4 1 1 1 1 0  DT 9 X DA 10 X DG 12 X 10 1.19 1.19 75.5 -2.29 -0.59 27.5 83 10 5 2 3 0 1 0  DG 4 X DG 5 X DT 6 X DA 7 X DG 8 X DT 9 X DA 10 X DG 12 X DT 18 X DA 19 X DG 20 X 11 1.92 1.96 76.1 -2.42 -0.57 29.9 82 13 6 2 4 1 1 0  DT 9 X DA 10 X DG 12 X DG 20 X Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.