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PDBsum entry 3dlh
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Tunnel analysis for: 3dlh calculated with  MOLE 2.0
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PDB id
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3dlh
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.09 |
2.58 |
18.5 |
0.25 |
0.01 |
15.8 |
87 |
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2 |
1 |
0 |
6 |
0 |
0 |
0 |
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2 |
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1.16 |
1.46 |
25.9 |
-0.43 |
0.01 |
8.8 |
73 |
3 |
1 |
0 |
4 |
1 |
2 |
0 |
DG 5 X DT 6 X
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3 |
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1.14 |
1.30 |
27.1 |
-0.33 |
0.09 |
8.2 |
72 |
3 |
0 |
0 |
4 |
1 |
2 |
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DT 6 X
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4 |
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1.31 |
1.38 |
16.8 |
-1.50 |
-0.22 |
17.5 |
71 |
4 |
0 |
0 |
1 |
1 |
1 |
0 |
DA 107 Y DG 108 Y
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5 |
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1.51 |
1.69 |
25.1 |
-1.44 |
0.04 |
20.4 |
73 |
5 |
2 |
0 |
1 |
1 |
1 |
0 |
DA 7 X
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6 |
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1.38 |
1.85 |
16.7 |
-1.07 |
0.22 |
6.2 |
54 |
0 |
1 |
0 |
2 |
1 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program