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PDBsum entry 3bsn

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 3bsn calculated with MOLE 2.0 PDB id
3bsn
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.12 1.75 26.4 0.38 0.21 6.2 72 1 1 2 6 2 0 0  C 4 T C 5 T
2 1.18 2.95 29.0 0.63 0.26 5.2 81 1 1 2 9 1 0 0  C 4 T C 5 T
3 1.20 1.77 92.7 -0.56 -0.35 10.7 81 5 2 4 10 2 1 0  C 3 P C 4 P C 5 P U 1 T G 2 T C 4 T C 5 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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