PDBsum entry 3bji Go to PDB code:  Pore analysis for: 3bji calculated with MOLE 2.0 PDB id 3bji Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.97 2.29 25.1 0.49 0.10 6.6 77 2 3 1 3 1 2 1   2 2.09 2.10 27.4 -1.34 -0.68 7.8 90 1 3 3 1 0 1 0   3 1.45 1.45 36.2 -1.81 -0.56 16.2 90 5 2 5 3 1 0 0   4 1.59 1.99 38.7 -1.85 -0.58 15.8 86 6 2 5 2 1 1 0   5 2.38 2.71 45.8 -1.01 -0.32 15.1 76 3 2 2 4 1 2 3   6 1.57 1.91 52.0 -1.56 -0.23 21.1 79 7 3 3 5 3 1 0   7 2.38 3.39 52.7 -2.88 -0.54 30.7 85 9 4 6 1 0 1 0   8 1.84 2.81 55.5 -1.73 -0.69 12.8 85 2 4 7 3 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.