PDBsum entry 3b8h Go to PDB code:  Pore analysis for: 3b8h calculated with MOLE 2.0 PDB id 3b8h Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   21 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.38 3.38 30.8 -0.90 -0.17 15.3 84 3 4 2 2 2 0 0   2 1.54 1.54 35.5 -1.36 -0.36 22.4 82 6 4 2 2 2 0 0   3 1.66 1.90 45.3 -0.59 -0.27 10.3 73 3 3 2 4 2 2 0   4 2.44 2.46 51.1 -1.37 -0.50 16.3 83 3 5 4 3 1 1 0   5 1.76 1.92 59.8 -0.81 -0.13 15.2 76 5 3 3 5 3 0 0   6 1.99 2.27 60.8 -1.78 -0.67 17.8 86 5 5 6 2 1 1 0   7 2.29 3.94 86.9 -1.56 -0.32 22.8 83 10 5 5 4 2 1 0   8 1.51 1.51 110.6 -1.41 -0.26 24.6 85 12 9 4 9 1 1 0   9 1.79 1.95 114.0 -2.07 -0.53 23.1 84 13 11 8 7 1 2 0   10 1.91 1.93 115.1 -1.84 -0.54 21.1 83 12 13 11 6 3 4 0   11 2.68 4.37 120.6 -1.52 -0.34 19.6 82 11 9 7 10 2 2 0   12 1.94 2.25 121.3 -1.49 -0.46 19.1 81 12 12 8 8 3 3 0   13 1.55 1.46 133.5 -1.21 -0.30 20.1 83 15 9 5 9 3 1 0   14 1.51 1.43 175.7 -1.95 -0.49 24.3 84 19 15 10 7 2 3 0   15 1.51 1.44 182.3 -1.55 -0.35 22.4 82 17 13 9 10 3 3 0   16 1.49 1.41 209.6 -1.37 -0.39 19.9 81 17 14 6 9 4 4 0   17 1.88 2.24 36.6 -1.32 -0.27 18.9 85 4 4 4 5 1 1 0   18 2.89 4.93 42.6 -2.36 -0.66 25.1 86 4 4 4 2 0 1 0   19 1.26 1.29 47.4 -2.01 -0.59 22.0 83 6 3 4 3 1 1 0   20 2.48 2.48 60.6 -1.59 -0.53 19.1 84 4 6 5 3 1 1 0   21 1.28 1.35 92.1 -1.95 -0.52 21.6 85 9 9 12 5 3 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.