PDBsum entry 3b8h Go to PDB code:  Tunnel analysis for: 3b8h calculated with MOLE 2.0 PDB id 3b8h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.66 21.9 -1.31 -0.43 17.1 78 5 1 1 2 1 0 0   2 1.28 1.63 16.0 -1.95 -0.30 22.9 76 2 2 0 1 0 2 1   3 1.27 1.56 20.2 -1.00 -0.01 19.4 78 2 2 0 4 0 2 1   4 1.10 1.19 27.7 1.00 -0.01 3.8 85 1 0 3 8 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.