PDBsum entry 2yvc Go to PDB code:  Tunnel analysis for: 2yvc calculated with MOLE 2.0 PDB id 2yvc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.53 41.0 -0.03 -0.09 4.4 78 0 2 3 7 4 0 0   2 1.20 1.53 43.7 -1.17 -0.34 11.4 80 3 3 5 6 4 1 0   3 1.20 1.52 49.9 -1.03 -0.19 11.8 77 4 1 4 9 5 0 0   4 1.11 2.77 50.8 -0.39 0.06 7.9 73 2 1 3 7 6 1 0   5 1.22 1.55 52.5 -1.93 -0.51 21.5 81 7 5 6 6 3 0 0   6 1.21 1.53 52.6 -1.71 -0.36 19.0 79 7 3 6 7 4 2 0   7 1.24 1.54 55.8 -2.14 -0.55 24.1 83 7 6 7 6 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.