PDBsum entry 2yvc Go to PDB code:  Pore analysis for: 2yvc calculated with MOLE 2.0 PDB id 2yvc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.44 28.1 -1.11 -0.25 9.1 84 3 1 4 3 0 2 0   2 1.91 2.19 28.2 -0.93 0.09 14.5 77 4 1 4 4 2 0 0   3 1.80 1.99 29.4 -2.52 -0.28 26.6 80 6 2 6 2 1 0 0   4 1.41 1.41 29.5 -0.39 -0.25 7.6 80 0 3 4 2 2 1 0   5 3.21 5.26 38.6 -2.62 -0.43 29.3 82 6 5 5 4 0 0 0   6 1.79 1.98 50.3 -2.07 -0.24 22.9 80 5 5 6 6 1 0 0   7 3.15 3.34 51.1 -2.49 -0.32 35.2 78 11 3 2 4 1 0 0   8 1.36 1.36 56.0 -2.12 -0.55 23.4 83 7 6 8 3 2 0 0   9 1.37 1.36 57.0 -1.16 -0.14 13.2 76 5 2 6 6 5 0 0   10 1.63 1.80 59.0 -2.10 -0.46 23.6 82 11 2 4 2 0 2 0   11 1.94 4.24 60.7 -2.21 -0.43 25.4 81 10 7 7 5 3 0 0   12 3.16 3.34 62.8 -2.71 -0.35 34.5 79 15 3 4 4 1 0 0   13 1.79 1.98 67.0 -2.28 -0.21 29.1 76 12 3 4 5 2 0 0   14 1.38 1.37 70.3 -1.80 -0.53 17.4 81 6 3 9 3 3 1 0   15 1.90 4.32 73.9 -2.34 -0.51 28.8 83 14 7 10 4 1 2 0   16 1.87 4.05 74.9 -1.72 -0.21 22.4 79 12 4 8 7 4 2 0   17 1.51 1.63 81.6 -2.13 -0.48 22.3 79 13 4 8 5 4 1 0   18 1.36 1.37 89.0 -1.66 -0.42 12.9 81 7 4 9 5 3 3 0   19 2.08 2.25 89.6 -1.81 -0.25 17.6 80 9 4 8 7 3 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.