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PDBsum entry 2w8h

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Pore analysis for: 2w8h calculated with MOLE 2.0 PDB id
2w8h
Pores calculated on whole structure Pores calculated excluding ligands

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20 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.52 3.59 26.3 -2.12 -0.15 18.9 70 5 0 2 0 1 2 1  MTN 1335 F
2 2.52 3.59 26.6 -2.11 -0.16 17.0 69 5 0 2 0 1 3 1  MTN 1335 E
3 2.52 3.59 27.0 -2.12 -0.19 16.5 69 5 0 2 0 1 3 1  MTN 1335 H
4 1.54 2.15 34.1 -1.33 -0.36 14.1 73 5 3 2 2 2 2 0  CL 1346 D
5 2.46 3.61 36.3 -2.26 -0.02 20.0 69 8 0 3 0 3 3 1  MTN 1335 C
6 2.49 3.65 36.5 -2.21 -0.07 19.8 69 8 0 3 0 3 3 1  MTN 1335 D
7 2.51 3.59 44.3 -2.36 -0.07 19.8 69 9 0 3 0 3 4 1  MTN 1335 G
8 2.52 3.59 56.4 -2.27 -0.12 21.2 67 7 0 2 0 3 4 1  MTN 1335 B
9 1.12 1.29 33.9 -0.71 -0.04 7.9 83 1 3 4 3 3 1 0  
10 1.30 1.39 43.2 -0.37 -0.09 6.8 84 2 2 3 3 4 1 0  
11 1.22 1.38 73.5 -0.65 0.00 9.4 83 3 2 6 7 4 1 0  
12 1.21 2.77 95.0 -0.51 -0.11 8.0 84 4 2 8 9 7 2 0  
13 1.19 2.19 99.3 -0.98 -0.31 10.6 89 2 4 10 4 4 1 0  
14 1.31 1.38 108.5 -0.65 -0.13 11.3 82 7 2 5 9 7 1 0  
15 1.28 1.45 109.6 -0.53 -0.21 7.0 86 5 3 8 9 6 4 0  
16 1.24 2.80 119.3 -0.59 -0.20 9.2 84 6 3 6 11 7 3 0  
17 1.27 1.37 123.7 -0.55 -0.15 9.5 83 8 2 6 11 8 2 0  
18 1.24 2.61 124.3 -0.50 -0.18 8.1 84 6 2 7 11 8 3 0  
19 1.15 1.32 145.1 -0.91 -0.11 12.6 85 7 7 8 11 5 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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