PDBsum entry 2w6j Go to PDB code:  Pore analysis for: 2w6j calculated with MOLE 2.0 PDB id 2w6j Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   21 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.87 1.98 36.2 -1.21 -0.24 21.7 74 3 5 0 3 2 1 0   2 1.55 1.70 38.1 -1.49 -0.35 25.1 73 4 4 0 4 2 1 0   3 1.46 1.66 44.3 -0.69 -0.37 15.0 85 1 5 3 10 0 1 0   4 2.58 2.58 47.2 -0.94 -0.38 15.6 79 5 4 2 5 0 0 0   5 1.46 1.66 65.0 -1.42 -0.47 19.7 71 5 6 0 3 4 2 0   6 1.26 1.62 67.6 -1.69 -0.46 17.8 83 5 4 4 4 3 1 0   7 1.46 3.10 72.9 -0.50 -0.16 13.1 77 4 7 3 12 4 1 0   8 1.57 1.80 80.0 -1.51 -0.52 22.1 87 5 11 5 11 0 3 0   9 2.87 3.05 115.9 -2.20 -0.49 23.6 84 12 11 12 8 3 2 0   10 1.33 1.40 118.9 -1.45 -0.32 18.5 79 13 6 6 6 7 3 0   11 1.35 1.42 122.8 -1.29 -0.25 16.9 80 12 8 10 10 7 3 0   12 2.59 2.83 123.0 -2.22 -0.63 21.7 85 10 6 8 5 1 4 0   13 1.55 1.64 126.5 -1.46 -0.51 22.9 83 9 18 4 12 3 1 0   14 2.25 2.36 137.6 -1.67 -0.43 22.3 81 14 14 8 13 5 2 0   15 1.28 2.13 154.8 -1.89 -0.47 22.2 82 16 16 14 12 5 2 0   16 1.55 1.58 156.3 -1.31 -0.37 20.0 81 12 15 7 14 6 3 0   17 1.66 1.79 155.0 -1.71 -0.47 23.0 85 13 19 10 16 3 5 0   18 2.60 2.78 178.0 -2.23 -0.55 23.5 85 15 14 12 11 2 3 0   19 2.43 2.43 187.4 -1.79 -0.47 22.4 81 15 16 9 13 4 3 0   20 1.56 1.72 211.6 -1.74 -0.50 23.1 85 16 21 10 18 2 6 0   21 1.56 1.61 212.8 -1.52 -0.42 20.9 81 15 17 7 16 6 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.