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PDBsum entry 2vwi

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Pore analysis for: 2vwi calculated with MOLE 2.0 PDB id
2vwi
Pores calculated on whole structure Pores calculated excluding ligands

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13 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.92 2.92 30.9 -2.21 -0.60 30.4 82 7 5 2 3 1 0 0  
2 2.22 2.31 32.7 -1.72 -0.45 25.1 83 8 2 2 3 0 0 0  
3 1.31 1.31 37.0 -0.32 -0.13 12.2 85 3 1 1 8 2 0 0  MG 1299 D ANP 1300 D
4 2.23 2.33 38.0 -2.01 -0.46 32.4 80 8 5 0 5 1 0 0  
5 1.27 1.40 41.3 0.65 0.11 7.4 86 2 2 2 9 2 0 0  ANP 1295 B
6 1.35 1.34 49.2 -1.83 -0.64 19.5 84 8 2 4 1 0 2 0  
7 1.94 1.94 62.1 -0.05 -0.07 13.0 82 2 3 4 8 2 1 0  MG 1293 B ANP 1295 B
8 2.94 3.01 62.6 -0.71 0.09 21.6 81 8 4 1 11 2 1 0  
9 3.02 4.22 66.2 0.07 0.19 12.3 79 5 4 3 11 4 2 0  
10 1.28 1.41 66.4 -0.17 -0.09 11.3 83 3 2 4 11 4 1 0  MG 1293 B ANP 1295 B
11 2.31 2.37 68.9 -1.17 -0.13 25.5 85 7 2 1 9 0 1 0  MG 1293 B ANP 1295 B
12 1.14 1.36 75.1 -0.74 -0.09 17.2 84 8 1 2 12 2 1 0  MG 1293 B ANP 1295 B
13 1.45 1.45 79.9 -0.95 -0.15 19.5 81 9 10 3 13 3 3 0  MG 1293 C ANP 1294 C
14 2.11 2.17 88.6 -2.48 -0.55 31.7 78 10 10 2 6 2 1 0  
15 2.12 2.17 93.5 -2.14 -0.37 26.8 82 9 3 2 5 1 1 0  ANP 1300 D
16 2.55 2.59 124.0 -1.15 -0.20 19.9 79 8 7 6 9 2 3 0  
17 2.12 2.16 148.5 -1.36 -0.15 22.6 77 12 6 5 11 3 4 0  ANP 1294 C
18 2.12 2.16 149.5 -1.24 -0.13 20.9 80 12 6 6 11 2 4 0  ANP 1300 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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