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PDBsum entry 2vwi

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2vwi calculated with MOLE 2.0 PDB id
2vwi
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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12 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.72 1.88 17.5 -2.22 -0.82 21.7 74 1 6 2 0 2 0 0  
2 1.81 1.96 27.9 -1.45 -0.30 25.1 72 5 3 0 2 2 0 0  
3 1.72 1.88 28.2 -2.33 -0.49 33.2 78 4 6 0 2 3 0 0  
4 1.74 1.89 29.5 -1.59 -0.47 22.0 77 6 2 2 2 2 0 0  
5 1.17 2.97 39.9 -2.73 -0.58 35.9 74 6 5 1 0 3 0 0  
6 1.31 2.87 46.4 0.20 0.21 10.2 77 4 2 1 9 4 0 0  ANP 1294 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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