 |
PDBsum entry 2vwi
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2vwi calculated with MOLE 2.0
|
PDB id
|
|
|
|
2vwi
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
12 tunnels,
coloured by tunnel radius |
 |
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.72 |
1.88 |
17.5 |
-2.22 |
-0.82 |
21.7 |
74 |
 |
1 |
6 |
2 |
0 |
2 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.81 |
1.96 |
27.9 |
-1.45 |
-0.30 |
25.1 |
72 |
5 |
3 |
0 |
2 |
2 |
0 |
0 |
|
 |
3 |
 |
1.72 |
1.88 |
28.2 |
-2.33 |
-0.49 |
33.2 |
78 |
4 |
6 |
0 |
2 |
3 |
0 |
0 |
|
 |
4 |
 |
1.74 |
1.89 |
29.5 |
-1.59 |
-0.47 |
22.0 |
77 |
6 |
2 |
2 |
2 |
2 |
0 |
0 |
|
 |
5 |
 |
1.17 |
2.97 |
39.9 |
-2.73 |
-0.58 |
35.9 |
74 |
6 |
5 |
1 |
0 |
3 |
0 |
0 |
|
 |
6 |
 |
1.31 |
2.87 |
46.4 |
0.20 |
0.21 |
10.2 |
77 |
4 |
2 |
1 |
9 |
4 |
0 |
0 |
ANP 1294 C
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |