PDBsum entry 2vdu Go to PDB code:  Pore analysis for: 2vdu calculated with MOLE 2.0 PDB id 2vdu Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.34 70.4 -1.90 -0.77 22.6 81 2 8 3 1 2 3 0  PO4 1287 F 2 1.14 1.16 73.2 -0.83 -0.12 20.4 81 3 6 1 5 3 1 0   3 1.98 2.23 67.5 -1.87 -0.43 18.8 85 10 2 8 4 1 3 0   4 2.13 2.24 32.2 -1.80 -0.31 22.7 90 7 1 6 3 0 0 0   5 1.28 2.27 25.5 -1.19 -0.12 28.6 77 5 4 1 3 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.