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PDBsum entry 2v4r

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Pore analysis for: 2v4r calculated with MOLE 2.0 PDB id
2v4r
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.32 2.32 28.0 -1.49 -0.59 17.0 68 4 1 0 0 2 0 0  DG 5 P DA 10 P DT 11 P DT 9 T DC 10 T DC 11 T DT
12 T DT 13 T
2 1.84 1.84 37.4 -1.77 -0.47 17.9 80 6 3 4 1 3 1 0  DG 5 P DT 12 P DC 13 P DG 6 T DA 7 T DA 8 T DT 9
T DC 10 T
3 1.88 1.86 43.3 -1.46 -0.63 15.8 88 6 2 4 1 0 0 0  DA 10 P DT 11 P DT 12 P DC 13 P DG 6 T DA 7 T DA
8 T DT 9 T DC 10 T DC 11 T DT 12 T DT 13 T
4 2.19 2.19 48.1 -0.32 0.01 19.7 93 5 1 2 6 0 0 0  DG 5 P DG 9 P DA 10 P DC 4 T M1G 5 T DG 6 T DA 7
T DA 8 T DT 9 T DC 10 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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