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PDBsum entry 2v4r
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Tunnel analysis for: 2v4r calculated with MOLE 2.0
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PDB id
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2v4r
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.30 |
1.50 |
17.3 |
2.38 |
1.00 |
9.1 |
87 |
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2 |
0 |
0 |
4 |
0 |
0 |
0 |
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DT 12 P DC 13 P DC 4 T M1G 5 T DG 6 T DA 7 T
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2 |
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1.29 |
1.49 |
22.9 |
0.90 |
0.20 |
11.7 |
91 |
2 |
1 |
0 |
5 |
0 |
0 |
0 |
DC 4 T M1G 5 T DG 6 T
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3 |
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1.30 |
1.50 |
29.6 |
-1.36 |
-0.11 |
27.2 |
94 |
4 |
0 |
2 |
2 |
0 |
0 |
0 |
DG 5 P DG 9 P DA 10 P DA 7 T DA 8 T DT 9 T DC 10 T
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4 |
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1.30 |
1.49 |
30.8 |
-0.87 |
-0.08 |
22.5 |
94 |
4 |
0 |
2 |
2 |
0 |
0 |
0 |
DG 5 P DG 9 P DA 10 P DA 7 T DA 8 T DT 9 T DC 10 T DC 11 T
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5 |
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1.30 |
1.48 |
46.0 |
-0.59 |
0.16 |
18.6 |
88 |
6 |
0 |
2 |
5 |
1 |
0 |
0 |
DGT 404 A DC 4 T M1G 5 T DG 6 T DA 7 T
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6 |
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1.42 |
3.02 |
23.3 |
1.81 |
0.55 |
10.7 |
82 |
2 |
1 |
0 |
5 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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