 |
PDBsum entry 2uvw
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2uvw calculated with MOLE 2.0
|
PDB id
|
|
|
|
2uvw
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
2 pores,
coloured by radius |
 |
3 pores,
coloured by radius
|
3 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.32 |
2.32 |
33.1 |
0.01 |
0.00 |
13.6 |
90 |
 |
2 |
1 |
1 |
5 |
0 |
1 |
0 |
 |
DT 12 P DC 13 P DC 4 T 8OG 5 T DG 6 T
|
 |
 |
2 |
 |
2.33 |
2.33 |
47.2 |
-0.51 |
0.08 |
22.1 |
90 |
6 |
1 |
2 |
6 |
0 |
1 |
0 |
DG 5 P DA 6 P DG 9 P DA 10 P DC 4 T 8OG 5 T DG 6 T DA 7 T DA 8 T DT 9 T DC 10 T
|
 |
3 |
 |
2.81 |
2.92 |
48.2 |
-0.70 |
0.02 |
20.2 |
92 |
5 |
1 |
3 |
4 |
0 |
0 |
0 |
DG 5 P DA 6 P DG 9 P DA 10 P DT 12 P DC 13 P DC 4 T 8OG 5 T DG 6 T DA 7 T DA 8 T DT 9 T DC 10 T
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |