spacer
spacer

PDBsum entry 2qw9

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2qw9 calculated with MOLE 2.0 PDB id
2qw9
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 3.69 28.7 -3.07 -0.41 36.3 79 7 4 2 0 3 0 0  
2 1.39 3.69 31.6 -2.97 -0.41 30.7 81 5 4 2 0 3 0 0  
3 1.28 3.08 34.0 -2.11 -0.61 23.5 86 4 5 2 1 2 1 0  
4 1.30 3.97 36.2 -3.08 -0.43 35.7 79 8 5 2 0 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer