PDBsum entry 2qw9 Go to PDB code:  Tunnel analysis for: 2qw9 calculated with MOLE 2.0 PDB id 2qw9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.44 1.58 17.9 -0.58 -0.24 11.2 89 0 2 1 4 1 2 0   2 1.52 2.20 17.4 -0.55 -0.20 11.2 89 0 2 1 4 1 2 0   3 1.59 1.79 24.2 -1.48 -0.44 22.6 87 4 3 1 2 1 0 0   4 1.58 1.79 26.0 -1.13 -0.31 18.1 83 3 5 0 2 2 1 0   5 1.25 3.08 35.4 -1.59 -0.46 23.2 89 4 5 2 4 1 1 0   6 1.27 3.95 39.5 -1.67 -0.44 25.4 80 5 7 1 2 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.