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PDBsum entry 2pcc

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Pore analysis for: 2pcc calculated with MOLE 2.0 PDB id
2pcc
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.37 26.8 -2.34 -0.71 27.4 78 4 5 1 0 1 1 0  
2 1.48 1.65 27.0 -0.36 -0.27 8.2 85 2 2 5 6 1 0 1  HEM 104 B
3 2.03 2.63 27.3 -2.44 -0.49 26.9 76 4 4 2 0 3 1 0  
4 1.54 1.73 27.6 -0.20 -0.20 8.7 82 2 2 4 4 1 0 1  HEM 104 D
5 2.05 2.14 27.7 -2.17 -0.51 33.2 73 9 5 1 2 2 0 0  
6 1.37 1.37 32.5 -1.91 -0.63 17.3 82 4 3 3 1 1 1 0  
7 2.05 2.14 37.3 -2.54 -0.50 36.7 73 12 5 1 2 2 0 0  
8 2.17 2.33 40.6 -2.75 -0.54 33.7 74 9 7 0 0 1 2 0  
9 1.34 1.37 60.5 -2.65 -0.65 30.2 77 9 7 3 0 2 2 0  
10 1.35 1.35 60.6 -2.64 -0.64 30.3 76 8 7 3 1 2 2 0  
11 2.21 2.35 61.6 -2.46 -0.51 33.9 75 11 9 1 2 2 0 0  
12 1.36 1.36 68.6 -2.22 -0.57 27.3 76 11 6 4 3 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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