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PDBsum entry 2pcc

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2pcc calculated with MOLE 2.0 PDB id
2pcc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 2.41 33.7 0.10 0.28 12.9 76 4 0 2 6 5 1 0  HEM 296 C
2 1.16 2.44 34.0 0.47 0.34 9.6 78 3 1 2 9 4 1 0  HEM 296 C SO4 300 C
3 1.13 1.26 35.2 0.47 0.35 10.6 77 3 1 2 9 4 2 0  HEM 296 A SO4 299 A
4 1.13 1.25 35.7 0.05 0.35 14.7 75 4 1 1 6 5 1 0  HEM 296 A
5 1.28 1.28 21.0 0.03 -0.36 6.0 88 1 0 0 2 1 0 0  
6 1.29 1.29 25.2 -0.15 -0.47 6.7 86 2 1 0 2 1 0 0  
7 1.29 1.29 16.7 -0.72 -0.40 13.5 82 2 1 1 3 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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