PDBsum entry 2p5g Go to PDB code:  Pore analysis for: 2p5g calculated with MOLE 2.0 PDB id 2p5g Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   29 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.31 3.31 28.6 -0.94 -0.33 14.5 82 1 4 3 1 3 0 0   2 1.85 2.09 35.8 -2.97 -0.79 35.9 83 4 5 3 0 0 0 0   3 1.23 1.24 58.1 -0.78 -0.35 14.8 72 5 5 1 4 5 2 0  MSE 85 A DC 20 K DG 21 K 4 1.31 1.31 61.6 -1.87 -0.34 21.5 81 7 4 5 2 3 0 0  MSE 65 B DA 112 H 5 1.35 1.34 66.0 -1.38 -0.33 15.4 79 6 4 3 2 3 1 0  DC 7 E 6 1.23 1.23 72.3 -1.07 -0.26 15.8 79 5 5 4 5 5 1 0  MSE 85 A DC 7 E DC 20 K DG 21 K 7 1.58 1.55 84.2 -0.13 -0.04 12.6 72 6 5 1 8 5 1 0  MSE 752 D DT 11 K DG 12 K DA 112 L DA 113 L 8 1.48 1.58 90.0 -1.64 -0.38 14.5 76 9 4 6 1 6 2 0  MSE 715 A DA 10 E DT 11 E DG 12 E DA 13 E DC 14 E DA 15 E DG 16 E DC 17 E DT 106 F DG 107 F DT 108 F DA 110 F DT 111 F DA 112 F DA 113 F DG 114 F 9 1.56 1.62 103.0 -1.67 -0.48 16.2 78 8 7 5 0 5 1 0  MSE 256 A DC 7 E DA 10 E DT 11 E DG 12 E DA 13 E DC 14 E DA 15 E DG 16 E DC 17 E DT 106 F DG 107 F DT 108 F DA 110 F DT 111 F DA 112 F DA 113 F DG 114 F DA 115 F 10 1.90 2.08 132.4 -2.10 -0.54 29.3 80 12 12 7 3 2 0 0  MSE 75 C 11 1.55 1.55 183.6 -1.85 -0.31 26.0 78 16 12 4 5 7 0 0  MSE 1 C MSE 85 C DC 4 I 12 1.69 1.97 206.6 -1.35 -0.42 19.2 83 17 11 10 7 4 0 0  MSE 553 C DA 2 I DC 3 I DC 4 I DG 5 I DC 7 I DA 112 J DA 113 J DG 114 J DA 115 J 13 2.08 2.15 215.1 -1.62 -0.43 24.6 80 14 19 8 8 5 0 0  MSE 715 B MSE 75 C 14 1.75 1.93 269.3 -1.22 -0.39 19.3 84 18 17 11 12 4 0 0  MSE 553 C DA 2 I DC 3 I DC 4 I DG 5 I 3DR 6 I DC 7 I DA 112 J DA 113 J DG 114 J DA 115 J 15 1.13 1.40 328.9 -1.54 -0.27 18.5 77 21 17 17 9 19 3 0  MSE 347 A MSE 65 B MSE 592 B MSE 670 B MSE 674 B MSE 681 B DC 7 E DA 115 F 16 1.17 1.38 335.1 -1.60 -0.31 18.8 78 22 15 17 8 16 3 0  MSE 592 B MSE 670 B MSE 674 B MSE 681 B MSE 715 B DC 20 K DG 21 K DG 101 L DC 102 L DG 103 L 17 1.28 1.40 355.1 -1.61 -0.27 18.9 78 22 18 18 10 18 4 0  MSE 347 A MSE 592 B MSE 670 B MSE 674 B MSE 681 B MSE 715 B DC 7 E DA 115 F 18 1.18 1.30 358.3 -1.40 -0.24 17.8 78 23 18 16 10 17 4 0  MSE 347 A MSE 592 B MSE 670 B MSE 674 B MSE 681 B DA 10 E DT 11 E DG 12 E DA 13 E DC 14 E DA 15 E DG 16 E DC 17 E DT 106 F DG 107 F DT 108 F DA 110 F DT 111 F DA 112 F DA 113 F DG 114 F DA 115 F DA 112 H 19 1.66 1.71 32.2 -0.95 -0.64 10.6 93 2 0 3 0 1 1 0  DG 12 I DA 13 I DC 14 I DA 15 I DG 16 I DC 17 I DC 18 I DG 104 J DG 107 J DT 108 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.